Did tiny algae fell mighty dinosaurs?

Like the novel, War of the Worlds, it is best to fear the tiny.

Or at least it might have been when the dinosaurs roamed the earth.

Want to know more, or to know how the heck paleontologists figure out how a microorganism caused fossils to form?

Read about it here!

bone beds.jpg


Utah Paleontologists Turn to Crowdfunding for Raptor Project

Utahraptor, 23 feet long and weighing over a ton, was one of the largest dromaeosaurs, feathered, sickle-clawed dinosaurs closely related to birds. Since its discovery in 1991, it has been the subject of a popular novelassorted documentaries and tie-in toys from “Jurassic Park.” But for all its fame, the predator has been known primarily from only a few remains. That changed in 2001, when a geology student found a leg bone emerging from a hillside in the Cedar Mountain formation in eastern Utah. You see, millions of years ago, on a mud flat somewhere in Cretaceous Utah, a group of Utahraptors made a grave mistake: They tried to hunt near quicksand. The pack’s poor fortune has given modern paleontologists an opportunity to decode the giant raptor — its appearance, growth and behavior — but only if they can raise the money.

Enter “The Utahraptor Project,” started on GoFundMe last year with a $100,000 goal. It offers backers access to a field worker’s blog, a live “Raptor Cam” and digital models of the find put together through the process of photogrammetry.



Africa’s next top animal intelligence model

Spotted hyenas are found in just about every habitat in sub-Saharan Africa including human-disturbed areas and fully urbanized ones (i.e., cities) (Yirga Abay, Bauer, Gebrihiwot, & Deckers, 2010). While most large carnivores in Africa are decreasing in number, spotted hyenas are thriving. One reason for this inconsistency may be their high degree of behavioral flexibility; they’re dietary generalists eating everything and anything from termites to elephants (Holekamp & Dloniak, 2010).

Want to know more? Read about it here.



Notes from the Field: Above the Arctic Circle!

Friend and sometime contributor, Devin Drown, has recently started up a research program at the University of Alaska Fairbanks (Congrats Devin!). And this summer he lead an army of undergraduates on a series of interesting projects near or above the Artic Circle.

Sadly, coordinating and advising an army of undergraduates doesn’t leave too much time for writing blog posts. But he has kindly sent me these interesting snippets from the field. Check them out!

Toolik Field Station to use MinION sequencing.


Fairbanks Permafrost Experiment Station


Gathering Ancient DNA from Permafrost



Notes from the Field: The Maelstrom of Bee Viruses

I recently completed my PhD (yay!) and started my postdoc (eep!). I’m working at Martin-Luther University in Halle-Wittenburg. It’s no secret that I’m obsessed with the genetics of coevolution, I studied it in snails and trematodes in New Zealand for the last 6 years. So this postdoc is a change of pace in a very similar subject.



I’m studying the genetics of host-parasite coevolution in bees and their viruses. Specifically, I’m looking at host shifts, the genetics of increased virulence and the effect of recombination and migration on local adaptation. WHO’S EXCITED JUST BY READING THAT LAST SENTENCE? Me.

Honey bees with their varroa mites (the red dots near their wings)

Honey bees with their varroa mites (the red dots near their wings)

Let’s start with a little background. Bees have been declining across Europe and the US for the last few decades and the reason why isn’t quite clear. One hypothesis is that it is due to infestation with varroa mites, tiny mites that feed on the hemolymph of honey bees and increased in prevalence across Europe over the past few decades (similar pattern around the world except for Australia). However, the extent to which the varroa kills/harms/reduces the fitness of honey bees is unclear.


Enter the virus (and me, really). There are a series of viruses that are found in bees everywhere, including in honey bees, bumble bees and wild bees, Deformed Wing Virus (DWV). But it’s been at relatively low levels, and doesn’t seem to cause serious mortality within hives. Unless, that is, DWV occurs with varroa mites. Then the virus sweeps through the population, annihilating the hive. So, is this increase in virulence of DWV associated with an ecological shift, such that the varroa mites are injecting the virus when they feed, rather than the bees simply eating the virus when it’s found on flowers? Or is it a genetic change that has caused the virus to sweep through populations where it previously was fairly benign. And does this effect honey bees, or is it spilling over into the bumble bee and wild bee populations?

Honey bees with DWV.

Honey bees with DWV.

Which brings me to the field. The first step of my postdoctoral position has been to collect honey bees and bumble bees from islands off the coast of Scotland. Why islands? Because everything on the mainland is saturated with varroa mites. To compare the effect of the virus on bumble bee populations with and without varroa we’re looking at three types of islands: islands without honey bees (varroa can only infect honey bees), islands with honey bees and that don’t have varroa, and islands with honey bees and varroa. The list of things I want to do with this data is long, and will involve another post (stay tuned), but for starters we’re looking for transcriptional difference between the virus in these three types of islands.

And maybe looking at local adaptation. Or trying to understand how long it takes negative frequency dependent selection to act within an haplodiploid population. Or using spatial covariance to find the genomic regions involved in coevolution. Stay tuned kids, this is going to get exciting.

In the meantime, I’ve got to go collect some more bees.

Where the bees are. In this case, Colonsay Scotland.

Where the bees are. In this case, Colonsay Scotland.