Friday Coffee Break, barnacle sex, crab lice, and chimps

credit ilovecoffeebook.com

credit ilovecoffeebook.com

Every Friday at Nothing in Biology Makes Sense! our contributors pass around links to new scientific results, or science-y news, or videos of adorable wildlife, that they’re most likely to bring up while waiting in line for a latte.

Amy was learning about Synesthesia this week over at the Neurocritic Blog. Do you taste shapes or hear in colors?

Noah (@NM_Reid) must be getting tired of winter and read up on Brazilian bikini waxes making crab lice an endangered species. Tom Houslay (@tomhouslay) asks via Twitter if we need protected areas or migration corridors setup. The Bug Girl (@bug_girl) has a different point of view that you should check out.

CJ says, who doesn’t love barnacle sex? Check out the lasted news that shocked scientists, well not CJ, over at Science NOW.

Do you have a diet of milk, meat, blood? Jeremy (@JBYoder) suggests you take a look at the Empirical Zeal blog to learn how the Maasai of Kenya can consume over 200% of the daily cholesterol intake yet remain relatively healthy.

How did they get here? A new study in PNAS shows ‘gene flow’ from India to Australia 4000 years ago. See the digested report here.

Sarah (@sarahmhird) is about fairness and chimps this week. Chimps may have a sense of fairness similar to humans. If you’re curious for yourself, on the BBC lab site, you can find out how your sense of “fair” relates to others with a morality test. The Lab UK site also has other tests and your results are used for scientific research.

Late breaking addition from CJ: Being Married Helps [MALE] Professors Get seo companies Ahead.

Friday Coffee Break, more news than a Giant Squid

Asian Palm Civet  (Wikimedia Commons)

Asian Palm Civet (Wikimedia Commons)

Every Friday at Nothing in Biology Makes Sense! our contributors pass around links to new scientific results, or science-y news, or videos of adorable wildlife, that they’re most likely to bring up while waiting in line for a latte.

Just about everyone here found the news from the Discovery Channel about the video footage of the giant squid facinating.  If you haven’t seen it yet, check out the clip at the bottom, it is just so bad ass looking. CJ recommends the blog Species New to Science for some additional background.

Following up on Sarah’s awesome post on Women in Science, why not check out how folks at the Eigenfactor Project compiled raw data on gender bias in publications and made a beautiful visualization. Devin (@devindrown) thinks it is particularly cool how the authors figured out how to sex the authors in the large corpus that is JSTOR. Be sure to read the methods for the details.

Sarah (@sarahmhird) points out this excellent blog post form Dr. Bik on the Postdoc life which follows up on the fallout from the Forbes story about Professors having least stressful job.

Via Jeremy (@JBYoder) see how conservationists are using the DNA inside fly guts to census biodiversity from Ed Yong (@edyong209) over at the Not Exactly Rocket Science section of Phenomena.

THE most unbelievable title and figure Sarah’s (@sarahmhird) ever seen. Check out this apt named publication in PLoS Neglected Tropical Diseases. Curse words are not just for when you experiment goes awry anymore.

Apparently nothing is absolute anymore. A study in published in Nature cooled quantum gas below absolute zero. Amy didn’t know that it was possible, did you?  Don’t lag behind the times. Check it out now. (You can get the story over at Scientific American as well.)

CJ is all about visual animals today and the Tardigrade is no exception. Check out this one because his face is so darn cute.

Via Amy: A study in Europe finds that choosing your child’s name poorly may make him/her dumber and lonelier.  If you’re thinking about procreating, this might be topically relevant for you.

When extreme violence can’t be explained, is genetic analysis warranted? You can read the Nature editorial here.

Amy highlights this exciting news: JSTOR begins offering free yet limited access to its online academic seo company library. Very helpful for when you are outside your institution, or lack access generally.

Did you know this existed, 2012 in Science? Now you do thanks to Sarah (@sarahmhird).

And now, what you’ve been waiting for, the Giant Squid!

Friday Coffee Break, a new year begins

Every Friday at Nothing in Biology Makes Sense! our contributors pass around links to new scientific results, or science-y news, or videos of adorable wildlife, that they’re most likely to bring up while waiting in line for a latte.

Aeropress and mug

credit: Rik Panganiban

Massive open online courses (MOOCs) have caught Devin’s eye (@devindrown). This January the Santa Fe Institute is offering an Introduction to Complex Systems Science. You don’t need a science or math background.

Things to think about for New Year’s Resolutions related to health.  It’s the little things that matter says Jonathan (‪@Bonovox1984)

Why not check out what Carl Zimmer on the Loom blog writes about sex differences in spatial abilities over at National Geographic’s Phenomena. Sarah  (@sarahmhird) feared this article (Of Men, Navigation, and Zits) was going to be drawn into evolutionary psychology BS but thankfully, Zimmer is smarter than that.

Via Jeremy (@JBYoderWhy not see what makes humans so restless and learn about human migration.This looked like it was going to go into deep adaptationist territory, then all of a sudden actual population geneticists started showing up.

Noah (@NM_Reid) recommends this story on how the tree frog is redefining conventional wisdom about evolution over at the Smithsonian Magazine. He also thought this article on the a biological field station in the Amazon is worth checking out.

They say scariest of the deep sea, but Sarah (@sarahmhird) says coolest monsters, take a look over at the seo companies Smithsonian and decide for yourself.

Friday Coffee Break

coffee cherries

Before and After – coffee cherries (right) & green coffee beans (left)

Every Friday at Nothing in Biology Makes Sense! our contributors pass around links to new scientific results, or science-y news, or videos of adorable wildlife, that they’re most likely to bring up while waiting in line for a latte.

Scientists have discovered a (potential) new species of spider in the Peruvian Amazon that builds spider-like decoys within its web.  While other species of spiders are known to exhibit similar behavior, this species appears to make particularly elaborate structures. (From Sarah)

Here is some advice on what makes a good PhD application from the point of view of a PI at Columbia University. (From Devin)

Did you know that there are fields of ice flowers in the arctic ocean? Scientists studying them have once again found abundant life where it is least expected. (From CJ)

From Nature, here are the top 11 images and top 10 scientists of 2012.  Check out my favorite (and theme-appropriate) image below! (From CJ & Amy).

Caffeine Crystals Cavanagh and McCarthy

Caffeine Crystals

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Friday Coffee Break

800px-CoffeeBerry

Coffee Berries

Every Friday at Nothing in Biology Makes Sense! our contributors pass around links to new scientific results, or science-y news, or videos of adorable wildlife, that they’re most likely to bring up while waiting in line for a latte.

The Horowitz Dog Cognition Lab in NYC is investigating how humans and dogs play together together by cataloging behaviors displayed in short video clips contributed by dog owners from around the world.  To participate, submit a video of you and your dog here. (From Sarah)

The filmmakers from Chasing Ice show us what it is like when an iceberg, roughly the size of Manhattan, breaks up right in front of our eyes. (From CJ)

Applying for jobs? Check out this comprehensive guide to the Academic CV.  (From Jeremy)

Here is an interesting post from Scientific American on the biology of Jewel Caterpillars. If you are unfamiliar with the awesomeness of these critters, just check out the picture below! (From Noah)

Still trying to find a gift for that tricky population geneticist on your Christmas list? Look no further than the 2012 Gift Guide for Population Geneticists from Lost in Transcription. (From Devin)

In response to the popularity of their recent post on advice for graduate seo companies students, The Molecular Ecologist has put together a carnival of advice titled: Knowing What I Know Now. (From Jeremy)

jewel caterpillar 2

Jewel Caterpillar

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Friday Coffee Break

Coffee_Flowers

Coffea arabica flowers

Every Friday at Nothing in Biology Makes Sense! our contributors pass around links to new scientific results, or science-y news, or videos of adorable wildlife, that they’re most likely to bring up while waiting in line for a latte.

Researchers have found that the insecticidal properties of cigarette butts protect the nests of urban birds from parasites.  Could this be a clever adaptation to an urban environment? (From Jeremy)

There is a new podcast for biologists by biologists.  Check it out at Breaking Bio. (From Devin)

It turns out that children get into their mother’s head both metaphorically and physically. Researchers have found that children’s cells not only circulate in the mother’s bloodstream during pregnancy, but can also become permanently embedded in the mother’s brain. (From Sarah)

Slate.com has a new series of articles about Pandemics.  Go check out why bats are the world’s most dangerous animal or why koalas have horrible health.  (From Devin)

A new documentary, ‘Extraordinary Ordinary Junco‘, shows us how studying a common North American songbird has advanced our understanding of animal behavior, ecology and evolution. (From Noah)

And, finally, a beautiful slow-mo video of cheetahs running really fast. (From Sarah)

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Friday coffee break

luwak coffee

Every Friday at Nothing in Biology Makes Sense! our contributors pass around links to new scientific results, or science-y news, or videos of adorable wildlife, that they’re most likely to bring up while waiting in line for a latte.

From CJ: An apparently immortal jellyfish species reverts to its larval stage instead of dying.

[Christian] Sommer kept his hydrozoans in petri dishes and observed their reproduction habits. After several days he noticed that his Turritopsis dohrnii was behaving in a very peculiar manner, for which he could hypothesize no earthly explanation. Plainly speaking, it refused to die. It appeared to age in reverse, growing younger and younger until it reached its earliest stage of development, at which point it began its life cycle anew.

From Noah: It’s apparently possible to reconstruct the history of European wood-boring beetles from flaws in old woodcut prints. And someone has done just that.

The beetles only emerged a year or so after the [printing] blocks were carved. The holes they left must have been frustrating, but remaking them would have been expensive. So the blocks were kept and reused despite their defects, unless the beetles had really gone to town. The holes they left behind preserve a record of wood-boring beetles, across four centuries of European literature.

(The original journal article has a predictably delightful title.)

From Jon: Increased frequency of mammography has not increased the rates of detecting advanced breast cancer.

For years now, doctors like myself have known that screening mammography doesn’t save lives, or else saves so few that the harms far outweigh the benefits. Neither I nor my colleagues have a crystal ball, and we are not smarter than others who have looked at this issue. We simply read the results of the many mammography trials that have been conducted over the years. But the trial results were unpopular and did not fit with a broadly accepted ideology—early detection—which has, ironically, failed (ovarian, prostate cancer) as often as it has succeeded (cervical cancer, perhaps colon cancer).

From Devin: The purpose of data visualization has changed quite a bit — or maybe diversified? — since the origins of the field.

Those [early] charts were drawn to communicate, not to analyze. Snow’s cholera map often wrongly serves as an example of visual analysis, when it was drawn to convince. Similarly, Florence Nightingale’s chart of deaths in the Crimean War was used to illustrate her argument that improvements in hygiene would save many lives, and William Playfair illustrated the trade balance between England and its trade partners. [links sic.]

From Sarah: Microbiologists have found bacteria living in a sub-freezing, super-salty, oxygen-starved Antarctic lake.

Despite the very cold, dark and isolated nature of the habitat, the report finds that the brine harbors a surprisingly diverse and abundant assemblage of bacteria that survive without a present-day source of energy from the sun. Previous studies of Lake Vida dating back to 1996 indicate that the brine and its’ inhabitants have been isolated from outside influences for more than 3,000 years.

And: the Molecular Ecologist is still taking contributions for a blog carnival of “Knowing What I Know Now.”

Friday turkey break

Pumpkin Pie Season Again

Every Friday at Nothing in Biology Makes Sense! our contributors pass around links to new scientific results, or science-y news, or videos of adorable wildlife, that they’re most likely to bring up while waiting in line for a latte — or while recovering from a turkey-induced coma.

From Jon: Psychiatrists consider one possible reason why genes for psychiatric disorders persist in spite of their selective disadvantages, and find some supporting evidence.

Another theory is that the genetic mutations that cause a disorder in one person somehow make that person’s sibling more likely to have children. In a situation like that, the mutation offers a net benefit to a person’s family.

A team of Swedish and British scientists recently tested these theories by comparing the rates at which people suffering from mental illness have kids to those of their siblings. The data came from a medical database of more than 2 million Swedes.

From Noah: A new comprehensive study finds that, on average, new species aren’t formally described and named until 21 years after samples are first collected.

Given the recent increase in extinction rates due to human activities, however, a species can go extinct between the time it is collected and when it is written up. Many of the new species being identified are already endangered, notes Lee Grismer, a biologist at La Sierra University in Riverside, California. “A median shelf life of 12 years is catastrophic,” he says. “We will not save biodiversity with this.” Fontaine agrees: “It’s difficult to protect things we don’t know about.”

And from Sarah: A helpfully complete fossil lets paleontologists clarify the relationship between modern great white sharks and even bigger prehistoric sharks.

“The nice thing about this new species is that we have an articulated set of jaws which almost never happens and we could see that the third anterior tooth is curved out, just like in the tooth row of mako sharks today,” [Professor Dana Ehret of Monmouth University] said.

Friday coffee break

rem:everybody hurts

Every Friday at Nothing in Biology Makes Sense! our contributors pass around links to new scientific results, or science-y news, or videos of adorable wildlife, that they’re most likely to bring up while waiting in line for a latte.

Over at The Molecular Ecologist, Jeremy offered up some advice for grad students from a postdoc’s perspective, and invites contributions to a blog carnival of “Knowing What I Know Now.”

I can’t claim to have any blinding new insights — my own career is very much still under construction. But I’ve been interacting with a number of freshly-arrived graduate students this semester, and I’ve found myself thinking, after conversations with them, about what I might have done differently back when I was looking ahead to five (oops, six) years of grad school — and about what I did that worked out pretty well.

From Sarah: An English hospital stops an outbreak of methicillin-resistant Staphylococcus aureus using intensive DNA sequencing.

Doctors were concerned after MRSA was detected in 12 babies during routine screening.

However, current tests could not tell if it was one single outbreak being spread around the unit or if they were separate cases being brought into the hospital. About one in 100 people carry MRSA on their skin without any health problems.

To find out, researchers at the University of Cambridge and the Sanger Institute embarked on more sophisticated version of a paternity test.

They compared the entire genetic code of MRSA bugs from each baby to build a family tree. It showed they were all closely related and part of the same outbreak.

From Jon: A new polymer has the properties that could make it ideal as “skin” for prosthetic limbs — it’s flexible, electrically conductive, touch-sensitive, and self-healing.

Writing in Nature Nanotechnology, the researchers detail how they increased the conductivity of a self-healing polymer by incorporating nickel atoms, allowing electrons to “jump” between the metal atoms. The polymer is sensitive to applied forces like pressure and torsion (twisting) because such forces alter the distance between the nickel atoms, affecting the difficulty the electrons have jumping from one to the other and changing the electrical resistance of the polymer.

Friday coffee break

To Make a Coffee

Every Friday at Nothing in Biology Makes Sense! our contributors pass around links to new scientific results, or science-y news, or videos of adorable wildlife, that they’re most likely to bring up while waiting in line for a latte.

From Devin: In case slicing that bagel isn’t tricky enough for you, how about a mobius bagel?

From Sarah: Superb fairy-wren chicks learn to sing for their supper while they’re still in the egg.

Superb fairy-wren (Malurus cyaneus) mothers sing to their unhatched eggs to teach the embryo inside a ‘password’ — a single unique note — which the nestlings must later incorporate into their begging calls if they want to get fed.

The trick allows fairy-wren parents to distinguish between their own offspring and those of the two cuckoo species that frequently invade their nests.

From Noah: The good news is that the spade-t00thed whale isn’t extinct after all. The sad news is that we found this out when a mother and her calf beached and died.

Until now, we’ve only known about the spade-toothed beaked whale from a few bone samples, as no intact specimens have been discovered. This has made identifying the species extremely complicated.

And from Jeremy: A captive cockatoo at a research station in Austria has started making tools to pull cashews into his aviary. And there’s video: